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PMS1 (PMS1 homolog 1, mismatch repair system component)
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Curator:
Instituto Nacional del Cancer
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View PMS1 gene homepage
View graphs about the PMS1 gene database
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View all transcripts
View all transcripts of gene PMS1
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View all variants
View all variants affecting transcripts
View unique variants in gene PMS1
View all variants in gene PMS1
Full data view for gene PMS1
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View all individuals
View all individuals with variants in gene PMS1
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View all diseases
View all diseases associated with gene PMS1
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View all screenings for gene PMS1
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All variants in the PMS1 gene
The variants shown are described using the NM_000534.4 transcript reference sequence.
Error: Query
/variants/PMS1 returned error in code block Custom_ViewList::viewList().
Query : SELECT CONCAT(CAST(MIN(vog.id) AS UNSIGNED), IFNULL(CONCAT(":", CAST(MIN(vot.transcriptid) AS UNSIGNED)), "")) AS row_id, vot.id AS votid, vot.transcriptid, vot.position_c_start, vot.position_c_start_intron, vot.position_c_end, vot.position_c_end_intron, et.name as vot_effect, `VariantOnTranscript/Exon`, `VariantOnTranscript/DNA`, `VariantOnTranscript/Protein`, `VariantOnTranscript/Gene_Dosage`, `VariantOnTranscript/Co_ocurrence`, `VariantOnTranscript/RNA`, `VariantOnTranscript/Reference`, vog.id AS vogid, vog.chromosome, a.name AS allele_, uo.name AS owned_by_, CONCAT_WS(";", uo.id, uo.name, uo.email, uo.institute, uo.department, IFNULL(uo.countryid, "")) AS _owner, dsg.id AS var_statusid, dsg.name AS var_status, `VariantOnGenome/DNA`, `VariantOnGenome/Reference`, `VariantOnGenome/DBID`, `VariantOnGenome/dbSNP`, `VariantOnGenome/Remarks` FROM lovd_variants_on_transcripts AS vot LEFT OUTER JOIN lovd_variant_effect AS et ON (vot.effectid = et.id) LEFT OUTER JOIN lovd_variants AS vog FORCE INDEX FOR JOIN (PRIMARY) ON (vot.id = vog.id) LEFT OUTER JOIN lovd_alleles AS a ON (vog.allele = a.id) LEFT OUTER JOIN lovd_users AS uo ON (vog.owned_by = uo.id) LEFT OUTER JOIN lovd_data_status AS dsg ON (vog.statusid = dsg.id) WHERE (vog.statusid >= 7) AND (vot.transcriptid LIKE ?) GROUP BY vot.id ORDER BY position_c_start ASC, position_c_start_intron ASC, position_c_end ASC, position_c_end_intron ASC, `VariantOnTranscript/DNA` ASC LIMIT 100 OFFSET 0
Error : Error in PDOStatement::execute() while executing prepared query: SQLSTATE[HY000]: General error: 1030 Got error 28 from storage engine
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