Individual #00003550

Ethnic origin Italian/Swiss
Reference -
Remarks -
Cuadro familiar Breast cancer, Ovarian cancer
Panel size 1
Diseases Breast cancer
Owner name Guillermo Alberto-Instituto Fleming
Database submission license Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 InternationalCreative Commons License
Created by Instituto Nacional del Cancer


Stop! No phenotypes found for this individual!



Screenings


AscendingScreening ID     
Template     
Technique     
Lab     
Remarks     
Date of test     
Type of test     
Genes screened     
Variants found     
Owner     
0000003873 DNA SEQ-NG;CNV CIBIC – Centro de Diagnóstico Médico de Alta Complejidad S.A. - HERITAS ACD, AIP, AKT1, APC, ATM, BAP1, BARD1, BLM, BMPR1A, BRCA1, BRCA2, BRIP1, CASR, CDC73, CDH1, CDK4, CDKN1B, CDKN2A, CHEK2, DICER1, EPCAM, FANCA, FANCC, FANCL, FANCM, FH, FLCN, GALNT12, GREM1, HOXB13, KIT, LZTR1, MAX, MEN1, MET, MITF, MLH1, MRE11A, MSH2, MSH3, MSH6, MUTYH, NBN, NF1, NF2, NTHL1, PALB2, PIK3CA, PMS2, POLD1, POLE, POT1, PTEN, RAD50, RAD51B, RAD51C, RAD51D, RB1, RET, RINT1, SDHA, SDHAF2, SDHB, SDHC, SDHD, SMAD4, SMARCA4, SMARCB1, SPRED1, STK11, TERF2IP, TERT, TMEM127, TP53, TSC1, TSC2, VHL, XRCC2. 06-sep-2024 Multigenetic panel - 1 Guillermo Alberto-Instituto Fleming



Variants

Error: Query
/individuals/00003550 returned error in code block Individual::viewEntry().
Query : SELECT CONCAT(CAST(MIN(vog.id) AS UNSIGNED), IFNULL(CONCAT(":", CAST(MIN(vot.transcriptid) AS UNSIGNED)), "")) AS row_id, vog.id AS vogid, vog.chromosome, a.name AS allele_, eg.name AS vog_effect, uo.name AS owned_by_, CONCAT_WS(";", uo.id, uo.name, uo.email, uo.institute, uo.department, IFNULL(uo.countryid, "")) AS _owner, dsg.id AS var_statusid, dsg.name AS var_status, `VariantOnGenome/DNA`, `VariantOnGenome/Reference`, `VariantOnGenome/DBID`, `VariantOnGenome/dbSNP`, `VariantOnGenome/Remarks`, GROUP_CONCAT(DISTINCT `VariantOnTranscript/Exon` ORDER BY t.geneid, t.id_ncbi SEPARATOR ", ") AS `VariantOnTranscript/Exon`, GROUP_CONCAT(DISTINCT CONCAT(t.id_ncbi, ":", `VariantOnTranscript/DNA`) ORDER BY t.geneid, t.id_ncbi SEPARATOR ", ") AS `VariantOnTranscript/DNA`, GROUP_CONCAT(DISTINCT `VariantOnTranscript/Protein` ORDER BY t.geneid, t.id_ncbi SEPARATOR ", ") AS `VariantOnTranscript/Protein`, GROUP_CONCAT(DISTINCT `VariantOnTranscript/Gene_Dosage` ORDER BY t.geneid, t.id_ncbi SEPARATOR ", ") AS `VariantOnTranscript/Gene_Dosage`, GROUP_CONCAT(DISTINCT `VariantOnTranscript/Co_ocurrence` ORDER BY t.geneid, t.id_ncbi SEPARATOR ", ") AS `VariantOnTranscript/Co_ocurrence`, GROUP_CONCAT(DISTINCT `VariantOnTranscript/RNA` ORDER BY t.geneid, t.id_ncbi SEPARATOR ", ") AS `VariantOnTranscript/RNA`, GROUP_CONCAT(DISTINCT `VariantOnTranscript/Reference` ORDER BY t.geneid, t.id_ncbi SEPARATOR ", ") AS `VariantOnTranscript/Reference`, GROUP_CONCAT(DISTINCT t.geneid ORDER BY t.geneid, t.id_ncbi SEPARATOR ", ") AS genes, GROUP_CONCAT(DISTINCT t.geneid SEPARATOR ";") AS _geneid FROM lovd_variants AS vog LEFT OUTER JOIN lovd_alleles AS a ON (vog.allele = a.id) LEFT OUTER JOIN lovd_variant_effect AS eg ON (vog.effectid = eg.id) LEFT OUTER JOIN lovd_users AS uo ON (vog.owned_by = uo.id) LEFT OUTER JOIN lovd_data_status AS dsg ON (vog.statusid = dsg.id) LEFT OUTER JOIN lovd_screenings2variants AS s2v ON (vog.id = s2v.variantid) LEFT OUTER JOIN lovd_variants_on_transcripts AS vot ON (vog.id = vot.id) LEFT OUTER JOIN lovd_transcripts AS t ON (vot.transcriptid = t.id) LEFT OUTER JOIN lovd_variant_effect AS et ON (vot.effectid = et.id) LEFT OUTER JOIN lovd_chromosomes AS chr ON (vog.chromosome = chr.name) WHERE (vog.statusid >= 7) AND (s2v.screeningid LIKE ?) GROUP BY s2v.variantid ORDER BY chr.sort_id ASC, position_g_start ASC, position_g_end ASC, `VariantOnGenome/DNA` ASC, vog.chromosome ASC, vog.position_g_start LIMIT 100 OFFSET 0
Error : Error in PDOStatement::execute() while executing prepared query: SQLSTATE[HY000]: General error: 1030 Got error 28 from storage engine

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